Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_10189 | Not Available | Negative | 109917 - 110072 | 5874.21 |
| glycosyltransferase wbsx | SAMN05421747_10190 | Not Available | Positive | 110204 - 111376 | 46018.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421747_10191 | Not Available | Positive | 111373 - 112164 | 30612.3 |
| glycosyltransferase, gt2 family | SAMN05421747_10192 | Not Available | Negative | 112154 - 113113 | 37642.2 |
| hypothetical protein | SAMN05421747_10193 | Not Available | Positive | 113162 - 113281 | 4567.69 |
| hypothetical protein | SAMN05421747_10194 | Not Available | Positive | 113299 - 114309 | 38529.4 |
| phosphohistidine phosphatase | SAMN05421747_10195 | Not Available | Positive | 114360 - 114863 | 18448.8 |
| hypothetical protein | SAMN05421747_10196 | Not Available | Positive | 114884 - 116902 | 76788.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | SAMN05421747_10197 | Not Available | Positive | 116895 - 117419 | 18884.2 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN05421747_10198 | Not Available | Negative | 117416 - 118084 | 24749.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
