Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas melonis |
| Strain | TY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672700 bp
Thymine Count
677097 bp
Guanine Count
1385555 bp
Cytosine Count
1365338 bp
Genome Length
4100783 bp
Protein-coding Genes
3638 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trehalase | AVM11_02905 | Not Available | Positive | 657393 - 658934 | 56903.7 |
| hypothetical protein | AVM11_02910 | Not Available | Positive | 658951 - 659586 | 23518.1 |
| choline dehydrogenase | AVM11_02915 | Not Available | Positive | 659553 - 661172 | 58116.5 |
| gcn5-related n-acetyltransferase | AVM11_02920 | Not Available | Negative | 661601 - 661987 | 13897.6 |
| dihydrolipoyl dehydrogenase | AVM11_02925 | Not Available | Negative | 661987 - 663378 | 48203.2 |
| dihydrolipoamide succinyltransferase | AVM11_02930 | Not Available | Negative | 663489 - 664724 | 42427.0 |
| 2-oxoglutarate dehydrogenase subunit e1 | AVM11_02935 | Not Available | Negative | 664773 - 667625 | 104825.0 |
| succinate--coa ligase subunit alpha | AVM11_02940 | Not Available | Negative | 667848 - 668732 | 30062.4 |
| endonuclease | AVM11_02945 | Not Available | Negative | 668812 - 669102 | 11552.9 |
| malate dehydrogenase | AVM11_02950 | Not Available | Negative | 669191 - 670153 | 33341.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.