Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas melonis |
| Strain | TY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672700 bp
Thymine Count
677097 bp
Guanine Count
1385555 bp
Cytosine Count
1365338 bp
Genome Length
4100783 bp
Protein-coding Genes
3638 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | AVM11_02405 | Not Available | Negative | 534297 - 535421 | 38754.3 |
| pp_00474 | AVM11_02410 | Not Available | Positive | 535503 - 536519 | Not Available |
| two-component sensor histidine kinase | AVM11_02415 | Not Available | Positive | 536527 - 537570 | 37079.9 |
| nitrogen regulation protein nr(i) | AVM11_02420 | Not Available | Positive | 537567 - 538982 | 51225.6 |
| pas domain-containing sensor histidine kinase | AVM11_02425 | Not Available | Positive | 539088 - 541325 | 81013.2 |
| sigma-54-dependent fis family transcriptional regulator | AVM11_02430 | Not Available | Positive | 541331 - 542707 | 50305.5 |
| rna-binding protein hfq | AVM11_02435 | Not Available | Positive | 542836 - 543321 | 17962.0 |
| gtpase hflx | AVM11_02440 | Not Available | Positive | 543325 - 544617 | 47373.2 |
| nucleoside triphosphate hydrolase | AVM11_02445 | Not Available | Negative | 544627 - 545361 | 27009.8 |
| peptidase | AVM11_02450 | Not Available | Negative | 545395 - 546012 | 22504.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.