Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas melonis |
| Strain | TY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672700 bp
Thymine Count
677097 bp
Guanine Count
1385555 bp
Cytosine Count
1365338 bp
Genome Length
4100783 bp
Protein-coding Genes
3638 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit c | AVM11_11290 | Not Available | Positive | 3906081 - 3906377 | 11498.6 |
| marr family transcriptional regulator | AVM11_11295 | Not Available | Negative | 3906555 - 3907502 | 34428.9 |
| dna ligase-associated dexh box helicase | AVM11_11300 | Not Available | Negative | 3907563 - 3908561 | 36709.8 |
| dna ligase-associated dexh box helicase | AVM11_11305 | Not Available | Positive | 3908834 - 3911167 | 85515.8 |
| peptide chain release factor 3 | AVM11_11310 | Not Available | Positive | 3911942 - 3913468 | 56161.8 |
| mfs transporter | AVM11_11315 | Not Available | Negative | 3913750 - 3915009 | 44403.1 |
| tonb-dependent receptor | AVM11_11320 | Not Available | Negative | 3915165 - 3917537 | 84625.3 |
| tetr family transcriptional regulator | AVM11_11325 | Not Available | Positive | 3917654 - 3918310 | 23616.7 |
| merr family transcriptional regulator | AVM11_11330 | Not Available | Negative | 3918297 - 3918665 | 13933.7 |
| integration host factor subunit alpha | AVM11_11335 | Not Available | Negative | 3918671 - 3918970 | 10821.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.