Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas melonis |
| Strain | TY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672700 bp
Thymine Count
677097 bp
Guanine Count
1385555 bp
Cytosine Count
1365338 bp
Genome Length
4100783 bp
Protein-coding Genes
3638 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AVM11_11240 | Not Available | Positive | 3896643 - 3897020 | 13778.0 |
| hypothetical protein | AVM11_11245 | Not Available | Positive | 3897017 - 3897595 | 19889.2 |
| cytochrome c | AVM11_11250 | Not Available | Positive | 3897592 - 3898626 | 36598.2 |
| glutamine cyclotransferase | AVM11_11255 | Not Available | Negative | 3898739 - 3899488 | 26836.0 |
| cold-shock protein | AVM11_11260 | Not Available | Negative | 3900188 - 3901009 | 27208.6 |
| 3'-5' exonuclease | AVM11_11265 | Not Available | Positive | 3901301 - 3901921 | 23041.3 |
| lps export abc transporter periplasmic protein lptc | AVM11_11270 | Not Available | Positive | 3901926 - 3902573 | 23282.8 |
| osta family protein | AVM11_11275 | Not Available | Positive | 3902580 - 3903116 | 18346.9 |
| abc transporter atp-binding protein | AVM11_11280 | Not Available | Positive | 3903405 - 3904181 | 28150.1 |
| rna polymerase sigma-54 factor | AVM11_11285 | Not Available | Positive | 3904344 - 3905822 | 53009.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.