Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas melonis |
| Strain | TY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672700 bp
Thymine Count
677097 bp
Guanine Count
1385555 bp
Cytosine Count
1365338 bp
Genome Length
4100783 bp
Protein-coding Genes
3638 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-carbamoylputrescine amidase | AVM11_11040 | Not Available | Negative | 3855741 - 3856601 | 31593.5 |
| hypothetical protein | AVM11_11045 | Not Available | Negative | 3856610 - 3856960 | 12050.2 |
| agmatine deiminase | AVM11_11050 | Not Available | Negative | 3856965 - 3857936 | 34812.9 |
| peptidase m28 | AVM11_11055 | Not Available | Negative | 3857933 - 3859579 | 58784.3 |
| 30s ribosomal protein s4 | AVM11_11060 | Not Available | Negative | 3859975 - 3860589 | 23215.1 |
| hypothetical protein | AVM11_11065 | Not Available | Negative | 3860798 - 3861034 | 8292.85 |
| chorismate mutase | AVM11_11070 | Not Available | Positive | 3861140 - 3861469 | 11724.9 |
| rrna methyltransferase | AVM11_11075 | Not Available | Negative | 3861987 - 3862721 | 26359.7 |
| transcriptional regulator nrdr | AVM11_11080 | Not Available | Negative | 3862718 - 3863164 | 16969.2 |
| serine hydroxymethyltransferase | AVM11_11085 | Not Available | Negative | 3863364 - 3864674 | 46055.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.