Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas melonis |
| Strain | TY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672700 bp
Thymine Count
677097 bp
Guanine Count
1385555 bp
Cytosine Count
1365338 bp
Genome Length
4100783 bp
Protein-coding Genes
3638 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | AVM11_05135 | Not Available | Positive | 1997660 - 2000314 | 92154.8 |
| abc transporter permease | AVM11_05140 | Not Available | Negative | 2000311 - 2001846 | 53590.9 |
| abc transporter atp-binding protein | AVM11_05145 | Not Available | Negative | 2001843 - 2002595 | 26343.1 |
| short-chain dehydrogenase | AVM11_05150 | Not Available | Positive | 2002647 - 2003429 | 27233.5 |
| 4a-hydroxytetrahydrobiopterin dehydratase | AVM11_05155 | Not Available | Negative | 2003565 - 2003858 | 10922.7 |
| neutral zinc metallopeptidase | AVM11_05160 | Not Available | Positive | 2003894 - 2004331 | 15853.7 |
| heme abc transporter atp-binding protein ccma | AVM11_05165 | Not Available | Positive | 2004328 - 2004882 | 18687.0 |
| heme abc transporter permease ccmb | AVM11_05170 | Not Available | Positive | 2004882 - 2005523 | 21299.0 |
| hypothetical protein | AVM11_05175 | Not Available | Negative | 2005531 - 2005734 | 7331.75 |
| sam-dependent methyltransferase | AVM11_05180 | Not Available | Negative | 2005868 - 2006737 | 32616.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.