Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas melonis |
| Strain | TY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672700 bp
Thymine Count
677097 bp
Guanine Count
1385555 bp
Cytosine Count
1365338 bp
Genome Length
4100783 bp
Protein-coding Genes
3638 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein hu | AVM11_00340 | Not Available | Positive | 75060 - 75332 | 9428.39 |
| Trna-val | Not Available | Not Available | Positive | 75438 - 75512 | Not Available |
| hypothetical protein | AVM11_00350 | Not Available | Positive | 75698 - 76033 | 11624.1 |
| hypothetical protein | AVM11_00355 | Not Available | Positive | 76551 - 78194 | 55285.2 |
| tonb-dependent receptor | AVM11_00360 | Not Available | Positive | 78298 - 81138 | 102309.0 |
| oxygenase | AVM11_00365 | Not Available | Negative | 81304 - 81960 | 23984.4 |
| type ii secretory protein pulc | AVM11_00370 | Not Available | Positive | 82095 - 82937 | 29198.4 |
| type ii secretion system protein gspd | AVM11_00375 | Not Available | Positive | 82946 - 85141 | 76782.2 |
| type ii secretion system protein gspe | AVM11_00380 | Not Available | Positive | 85278 - 86876 | 57045.0 |
| type ii secretion system protein gspf | AVM11_00385 | Not Available | Positive | 86972 - 88195 | 44110.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.