Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas melonis |
| Strain | TY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672700 bp
Thymine Count
677097 bp
Guanine Count
1385555 bp
Cytosine Count
1365338 bp
Genome Length
4100783 bp
Protein-coding Genes
3638 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formaldehyde dehydrogenase, glutathione-independent | AVM11_14415 | Not Available | Positive | 1147384 - 1148595 | 43795.6 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | AVM11_14420 | Not Available | Positive | 1148937 - 1150046 | 39158.1 |
| glyoxalase | AVM11_14425 | Not Available | Positive | 1150099 - 1150497 | 13283.5 |
| s-formylglutathione hydrolase | AVM11_14430 | Not Available | Positive | 1150645 - 1151475 | 30592.1 |
| nadh dehydrogenase | AVM11_14435 | Not Available | Positive | 1151496 - 1152830 | 48396.1 |
| egg lysin | AVM11_14440 | Not Available | Positive | 1152802 - 1154145 | 49758.8 |
| excinuclease abc subunit b | AVM11_14445 | Not Available | Positive | 1154210 - 1156186 | 73707.4 |
| excinuclease abc subunit a | AVM11_14450 | Not Available | Positive | 1156209 - 1158848 | 95112.2 |
| peroxidase | AVM11_14455 | Not Available | Positive | 1159106 - 1160002 | 32323.8 |
| bacteriocin | AVM11_14460 | Not Available | Positive | 1159995 - 1160816 | 28948.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.