Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 1051433 - 1051510 | Not Available |
| two-component system nitrogen regulation response regulator ntrx | EDC27_0968 | Not Available | Negative | 1051550 - 1052956 | 53167.3 |
| pas/pac sensor signal transduction histidine kinase | EDC27_0969 | Not Available | Negative | 1053298 - 1055541 | 84827.5 |
| uncharacterized protein duf4390 | EDC27_0970 | Not Available | Negative | 1055551 - 1056129 | 22551.3 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | EDC27_0971 | Not Available | Negative | 1056232 - 1057170 | 34391.5 |
| hypothetical protein | EDC27_0972 | Not Available | Negative | 1057375 - 1058130 | 28620.7 |
| pas domain s-box-containing protein | EDC27_0973 | Not Available | Negative | 1058208 - 1061993 | 139163.0 |
| rnase iii | EDC27_0974 | Not Available | Negative | 1061990 - 1062715 | 26690.0 |
| d-alpha,beta-d-heptose 1,7-bisphosphate phosphatase | EDC27_0975 | Not Available | Positive | 1062824 - 1063375 | 20809.1 |
| phosphoenolpyruvate carboxykinase (atp) | EDC27_0976 | Not Available | Positive | 1063494 - 1065098 | 59591.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
