Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation protein | EDC27_0947 | Not Available | Negative | 1026134 - 1026904 | 27706.7 |
| tatd dnase family protein | EDC27_0948 | Not Available | Negative | 1026892 - 1027689 | 29934.1 |
| ribonucleoside-diphosphate reductase class ii | EDC27_0949 | Not Available | Positive | 1028047 - 1030341 | 83868.4 |
| endonuclease v | EDC27_0950 | Not Available | Positive | 1030357 - 1031019 | 24543.2 |
| hypothetical protein | EDC27_0951 | Not Available | Negative | 1031086 - 1031649 | 20482.6 |
| dna polymerase-3 subunit epsilon | EDC27_0952 | Not Available | Negative | 1031794 - 1032309 | 19437.3 |
| putative redox protein | EDC27_0953 | Not Available | Negative | 1032404 - 1033183 | 28076.7 |
| lysine methyltransferase | EDC27_0954 | Not Available | Negative | 1033207 - 1033908 | 25999.3 |
| hypothetical protein | EDC27_0955 | Not Available | Positive | 1034085 - 1034534 | 16414.8 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii) | EDC27_0956 | Not Available | Negative | 1034529 - 1035311 | 28825.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
