Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC27_0825 | Not Available | Negative | 915226 - 916335 | 42503.6 |
| mannose-1-phosphate guanylyltransferase | EDC27_0826 | Not Available | Negative | 916446 - 917483 | 37683.5 |
| beta-n-acetylhexosaminidase | EDC27_0827 | Not Available | Positive | 917639 - 918640 | 36994.3 |
| alanine-synthesizing transaminase | EDC27_0828 | Not Available | Positive | 918700 - 919887 | 44448.8 |
| homoserine dehydrogenase | EDC27_0829 | Not Available | Positive | 919917 - 921248 | 47789.2 |
| phosphoglycerate mutase | EDC27_0830 | Not Available | Positive | 921261 - 922490 | 44156.9 |
| acyl-coa thioester hydrolase | EDC27_0831 | Not Available | Positive | 922525 - 922962 | 17122.3 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | EDC27_0832 | Not Available | Positive | 922967 - 923707 | 26544.3 |
| hypothetical protein | EDC27_0833 | Not Available | Positive | 923867 - 924316 | 16745.6 |
| dna primase | EDC27_0834 | Not Available | Positive | 924459 - 926243 | 66162.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
