Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase-like protein | EDC27_0805 | Not Available | Positive | 896587 - 897207 | 23893.2 |
| hypothetical protein | EDC27_0806 | Not Available | Positive | 897180 - 898748 | 57888.1 |
| pyruvate formate lyase activating enzyme | EDC27_0807 | Not Available | Positive | 898823 - 899983 | 43317.0 |
| spermidine synthase | EDC27_0808 | Not Available | Negative | 899964 - 902354 | 87130.1 |
| l-threonine ammonia-lyase | EDC27_0809 | Not Available | Negative | 902351 - 903607 | 44408.3 |
| ribosomal protein l11 methyltransferase prma | EDC27_0810 | Not Available | Negative | 903735 - 904427 | 25453.4 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | EDC27_0811 | Not Available | Negative | 904492 - 905160 | 24887.9 |
| putative cold-shock dna-binding protein | EDC27_0812 | Not Available | Positive | 905482 - 905679 | 7366.62 |
| peptidyl-prolyl cis-trans isomerase c | EDC27_0813 | Not Available | Positive | 905756 - 906760 | 37401.5 |
| hypothetical protein | EDC27_0814 | Not Available | Positive | 906872 - 907066 | 7105.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
