Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | EDC27_0775 | Not Available | Negative | 867509 - 868426 | 34716.8 |
| s-adenosylmethionine decarboxylase | EDC27_0776 | Not Available | Negative | 868426 - 868806 | 14090.0 |
| 2-isopropylmalate synthase | EDC27_0777 | Not Available | Positive | 869274 - 870836 | 56096.2 |
| penicillin-binding protein 6 | EDC27_0778 | Not Available | Positive | 871128 - 872429 | 47691.7 |
| hypothetical protein | EDC27_0779 | Not Available | Negative | 872518 - 872610 | 3482.47 |
| putative fmdb family regulatory protein | EDC27_0780 | Not Available | Negative | 872692 - 872889 | 6865.1 |
| 4-carboxymuconolactone decarboxylase | EDC27_0781 | Not Available | Negative | 873144 - 873554 | 15035.4 |
| mrp family chromosome partitioning atpase | EDC27_0782 | Not Available | Positive | 873677 - 874561 | 31682.3 |
| zinc dependent phospholipase c | EDC27_0783 | Not Available | Negative | 874707 - 875534 | 31983.1 |
| umf1 family mfs transporter | EDC27_0784 | Not Available | Positive | 875558 - 876835 | 47086.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
