Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s12 methylthiotransferase accessory factor | EDC27_0745 | Not Available | Positive | 833167 - 834915 | 66304.6 |
| zinc protease | EDC27_0746 | Not Available | Negative | 834999 - 837980 | 110662.0 |
| hypothetical protein | EDC27_0747 | Not Available | Negative | 838190 - 838390 | 8209.6 |
| hypothetical protein | EDC27_0748 | Not Available | Negative | 838489 - 839349 | 33321.4 |
| superfamily ii dna or rna helicase | EDC27_0749 | Not Available | Negative | 839492 - 841045 | 58664.8 |
| hypothetical protein | EDC27_0750 | Not Available | Positive | 841246 - 841557 | 11709.9 |
| membrane-bound lytic murein transglycosylase a | EDC27_0751 | Not Available | Negative | 841713 - 842945 | 45803.7 |
| adenosylhomocysteinase | EDC27_0752 | Not Available | Negative | 842983 - 844239 | 45877.3 |
| methionine adenosyltransferase | EDC27_0753 | Not Available | Negative | 844301 - 845482 | 43037.5 |
| putative membrane protein | EDC27_0754 | Not Available | Negative | 845473 - 846192 | 26429.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
