Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h dehydrogenase (quinone) | EDC27_0063 | Not Available | Positive | 70277 - 70765 | 17261.9 |
| rna-binding protein | EDC27_0064 | Not Available | Negative | 70790 - 71224 | 15862.3 |
| rna polymerase primary sigma factor | EDC27_0065 | Not Available | Negative | 71301 - 72620 | 50514.5 |
| hypothetical protein | EDC27_0066 | Not Available | Negative | 72903 - 73889 | 36825.6 |
| alanyl-trna synthetase | EDC27_0067 | Not Available | Negative | 74270 - 76936 | 99181.8 |
| recombination protein reca | EDC27_0068 | Not Available | Negative | 76980 - 78014 | 37461.4 |
| 2'-5' rna ligase | EDC27_0069 | Not Available | Negative | 78051 - 78626 | 21442.3 |
| competence/damage-inducible protein cina | EDC27_0070 | Not Available | Negative | 78623 - 79888 | 45982.5 |
| hypothetical protein | EDC27_0071 | Not Available | Negative | 79901 - 81082 | 43173.7 |
| atp-dependent lon protease | EDC27_0072 | Not Available | Negative | 81073 - 83427 | 85737.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
