Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease proteolytic subunit clpp | EDC27_0630 | Not Available | Positive | 711028 - 711642 | 22746.6 |
| atp-dependent clp protease atp-binding subunit clpx | EDC27_0631 | Not Available | Positive | 711983 - 713239 | 46523.2 |
| atp-dependent proteinase | EDC27_0632 | Not Available | Positive | 713266 - 715719 | 91862.9 |
| Trna-val | Not Available | Not Available | Positive | 715815 - 715890 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 715899 - 715975 | Not Available |
| gdsl-like lipase/acylhydrolase family protein | EDC27_0637 | Not Available | Negative | 718201 - 719577 | 50472.8 |
| uncharacterized protein ybjt (duf2867 family) | EDC27_0638 | Not Available | Negative | 719606 - 721147 | 57454.5 |
| drug/metabolite transporter (dmt)-like permease | EDC27_0639 | Not Available | Positive | 721390 - 722334 | 33732.3 |
| butyryl-coa dehydrogenase/hypothetical protein | EDC27_0640 | Not Available | Negative | 722428 - 723576 | 41547.8 |
| 3-hydroxybutyryl-coa dehydrogenase | EDC27_0641 | Not Available | Negative | 723593 - 724444 | 31226.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
