Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC27_0610 | Not Available | Negative | 693580 - 694635 | 39769.0 |
| exonuclease sbcc | EDC27_0611 | Not Available | Positive | 694774 - 696342 | 58779.0 |
| dna repair exonuclease sbccd nuclease subunit | EDC27_0612 | Not Available | Positive | 696332 - 697327 | 36807.3 |
| hypothetical protein | EDC27_0613 | Not Available | Positive | 697311 - 697652 | 12894.9 |
| hypothetical protein | EDC27_0614 | Not Available | Positive | 697649 - 698365 | 27126.6 |
| pas domain s-box-containing protein | EDC27_0615 | Not Available | Positive | 698349 - 700406 | 76260.4 |
| prismane/co dehydrogenase family protein | EDC27_0616 | Not Available | Negative | 700454 - 700942 | 17318.2 |
| cytochrome c biogenesis protein | EDC27_0617 | Not Available | Positive | 701418 - 702806 | 51997.1 |
| cytochrome c-type biogenesis protein ccsb | EDC27_0618 | Not Available | Positive | 702813 - 703661 | 31793.9 |
| sec-independent protein translocase protein tata | EDC27_0619 | Not Available | Positive | 703712 - 703939 | 8101.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
