Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e1 component beta subunit | EDC27_0590 | Not Available | Negative | 670054 - 671040 | 36422.4 |
| pyruvate dehydrogenase e1 component alpha subunit | EDC27_0591 | Not Available | Negative | 671033 - 672139 | 41274.1 |
| hypothetical protein | EDC27_0592 | Not Available | Positive | 672543 - 672965 | 15274.5 |
| hypothetical protein | EDC27_0593 | Not Available | Negative | 673061 - 673633 | 21281.3 |
| selenocysteine lyase/cysteine desulfurase | EDC27_0594 | Not Available | Positive | 674009 - 675160 | 42751.3 |
| putative zn-dependent protease | EDC27_0595 | Not Available | Negative | 675157 - 676476 | 48954.1 |
| formylglycine-generating enzyme required for sulfatase activity | EDC27_0596 | Not Available | Negative | 676659 - 677699 | 39007.1 |
| putative abc transport system permease protein | EDC27_0597 | Not Available | Negative | 677711 - 678949 | 45195.9 |
| putative abc transport system permease protein | EDC27_0598 | Not Available | Negative | 678953 - 680170 | 44929.2 |
| putative abc transport system atp-binding protein | EDC27_0599 | Not Available | Negative | 680475 - 681161 | 24916.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
