Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate kinase | EDC27_0579 | Not Available | Positive | 656602 - 657276 | 25101.4 |
| dna polymerase iii delta prime subunit | EDC27_0580 | Not Available | Positive | 657280 - 658356 | 39741.9 |
| cell fate regulator yaat (psp1 superfamily) | EDC27_0581 | Not Available | Positive | 658301 - 659197 | 34289.5 |
| methionyl-trna synthetase | EDC27_0582 | Not Available | Positive | 659216 - 661180 | 74060.1 |
| tungstate transport system atp-binding protein | EDC27_0583 | Not Available | Negative | 661253 - 662320 | 39088.4 |
| tungstate transport system permease protein | EDC27_0584 | Not Available | Negative | 662331 - 663020 | 24166.3 |
| tungstate transport system substrate-binding protein | EDC27_0585 | Not Available | Negative | 663062 - 663901 | 29946.2 |
| hypothetical protein | EDC27_0587 | Not Available | Negative | 666944 - 667195 | 9121.26 |
| dihydrolipoamide dehydrogenase | EDC27_0588 | Not Available | Negative | 667227 - 668678 | 51406.4 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | EDC27_0589 | Not Available | Negative | 668731 - 670038 | 46883.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
