Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino-acid dehydrogenase | EDC27_0494 | Not Available | Negative | 557744 - 559003 | 45301.2 |
| alanine dehydrogenase | EDC27_0495 | Not Available | Positive | 559470 - 560594 | 40627.0 |
| amino acid abc transporter substrate-binding protein (paat family) | EDC27_0496 | Not Available | Positive | 560698 - 561501 | 29847.2 |
| amino acid abc transporter membrane protein 1 (paat family) | EDC27_0497 | Not Available | Positive | 561509 - 562177 | 24379.6 |
| amino acid abc transporter membrane protein 2 (paat family) | EDC27_0498 | Not Available | Positive | 562196 - 562864 | 24603.2 |
| pas domain s-box-containing protein | EDC27_0499 | Not Available | Negative | 563352 - 564863 | 56806.5 |
| pas domain s-box-containing protein | EDC27_0500 | Not Available | Negative | 564886 - 566805 | 72752.9 |
| response regulator receiver domain-containing protein | EDC27_0501 | Not Available | Negative | 567048 - 567452 | 15025.1 |
| di/tricarboxylate transporter | EDC27_0502 | Not Available | Negative | 567769 - 569577 | 65050.4 |
| hypothetical protein | EDC27_0503 | Not Available | Negative | 569883 - 570458 | 21648.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
