Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC27_0484 | Not Available | Negative | 544774 - 545256 | 18676.6 |
| histidine triad (hit) family protein | EDC27_0485 | Not Available | Negative | 545348 - 545758 | 15217.5 |
| putative zinc- or iron-chelating protein | EDC27_0486 | Not Available | Positive | 545963 - 546307 | 13109.9 |
| hlyd family secretion protein | EDC27_0487 | Not Available | Positive | 546480 - 547835 | 50397.6 |
| multidrug efflux pump subunit acrb | EDC27_0488 | Not Available | Positive | 547832 - 551062 | 118855.0 |
| outer membrane protein tolc | EDC27_0489 | Not Available | Positive | 551225 - 552652 | 52170.6 |
| coenzyme f420-reducing hydrogenase delta subunit | EDC27_0490 | Not Available | Positive | 553000 - 553629 | 22963.6 |
| glycosyltransferase involved in cell wall biosynthesis | EDC27_0491 | Not Available | Negative | 553603 - 554817 | 44180.3 |
| dcmr-like sensory protein | EDC27_0492 | Not Available | Negative | 555148 - 555792 | 23813.7 |
| sugar phosphate permease | EDC27_0493 | Not Available | Positive | 556170 - 557465 | 47089.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
