Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein trkh | EDC27_0474 | Not Available | Positive | 532147 - 533511 | 49026.8 |
| trk system potassium uptake protein trka | EDC27_0475 | Not Available | Positive | 533523 - 534188 | 24305.8 |
| adenylosuccinate lyase | EDC27_0476 | Not Available | Positive | 534215 - 535513 | 49369.7 |
| glucose-6-phosphate isomerase/transaldolase/glucose-6-phosphate isomerase | EDC27_0477 | Not Available | Negative | 535710 - 537422 | 61004.1 |
| hypothetical protein | EDC27_0478 | Not Available | Negative | 537685 - 538809 | 42094.9 |
| 1,4-dihydroxy-6-naphthoate synthase | EDC27_0479 | Not Available | Negative | 538810 - 539673 | 31812.3 |
| futalosine hydrolase | EDC27_0480 | Not Available | Negative | 539684 - 540535 | 30598.0 |
| pp_00457 | EDC27_0481 | Not Available | Positive | 541019 - 542170 | Not Available |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EDC27_0482 | Not Available | Positive | 542167 - 543912 | 64083.6 |
| glycosyltransferase involved in cell wall biosynthesis | EDC27_0483 | Not Available | Positive | 543929 - 544777 | 31912.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
