Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | EDC27_0421 | Not Available | Negative | 468438 - 470792 | 90043.2 |
| uncharacterized protein duf4214 | EDC27_0422 | Not Available | Negative | 470959 - 474060 | 104960.0 |
| hypothetical protein | EDC27_0423 | Not Available | Positive | 474777 - 475760 | 35767.3 |
| abc-type uncharacterized transport system substrate-binding protein | EDC27_0424 | Not Available | Positive | 475875 - 476774 | 32037.1 |
| signal transduction histidine kinase | EDC27_0425 | Not Available | Positive | 476980 - 478554 | 58118.9 |
| outer membrane cobalamin receptor | EDC27_0426 | Not Available | Positive | 478661 - 480820 | 79089.3 |
| two-component system ntrc family response regulator | EDC27_0427 | Not Available | Positive | 481014 - 482375 | 50294.1 |
| alpha-1,3-rhamnosyl/mannosyltransferase | EDC27_0428 | Not Available | Negative | 483222 - 484385 | 44121.2 |
| rep element-mobilizing transposase rayt | EDC27_0429 | Not Available | Negative | 484450 - 485310 | 33137.8 |
| hypothetical protein | EDC27_0430 | Not Available | Positive | 485716 - 486699 | 36469.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
