Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport system permease protein | EDC27_0400 | Not Available | Positive | 431031 - 431903 | 32589.2 |
| lipopolysaccharide transport system atp-binding protein | EDC27_0401 | Not Available | Positive | 431903 - 433126 | 45294.5 |
| hypothetical protein | EDC27_0402 | Not Available | Positive | 433363 - 433713 | 13700.6 |
| glycosyltransferase involved in cell wall biosynthesis | EDC27_0403 | Not Available | Positive | 433793 - 437512 | 140356.0 |
| gdpmannose 4,6-dehydratase | EDC27_0404 | Not Available | Positive | 437701 - 438747 | 39513.4 |
| o-antigen chain-terminating methyltransferase | EDC27_0405 | Not Available | Positive | 438942 - 440648 | 62668.8 |
| uncharacterized protein duf4214 | EDC27_0406 | Not Available | Positive | 441528 - 443021 | 54121.9 |
| glycosyltransferase involved in cell wall biosynthesis | EDC27_0407 | Not Available | Negative | 443116 - 446034 | 106139.0 |
| glycosyltransferase involved in cell wall biosynthesis | EDC27_0408 | Not Available | Negative | 446291 - 447538 | 46810.4 |
| ca2+-binding rtx toxin-like protein | EDC27_0409 | Not Available | Negative | 448019 - 450148 | 72531.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
