Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein d | EDC27_0390 | Not Available | Negative | 419367 - 421700 | 83297.5 |
| type ii secretion system (t2ss) protein m subtype b | EDC27_0391 | Not Available | Negative | 421722 - 422315 | 22228.9 |
| tfp pilus assembly protein piln | EDC27_0392 | Not Available | Negative | 422315 - 423625 | 48343.6 |
| type ii secretory pathway component pulk | EDC27_0393 | Not Available | Negative | 423683 - 424528 | 31798.2 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EDC27_0394 | Not Available | Negative | 424621 - 425370 | 27610.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EDC27_0395 | Not Available | Negative | 425373 - 425855 | 17894.6 |
| type ii secretion system protein h (gsph) | EDC27_0396 | Not Available | Negative | 425872 - 426324 | 16103.6 |
| type ii secretion system protein f (gspf) | EDC27_0397 | Not Available | Negative | 426308 - 427516 | 43893.6 |
| type ii secretion system protein e (gspe) | EDC27_0398 | Not Available | Negative | 427516 - 429021 | 55977.0 |
| alpha-1,3-rhamnosyl/mannosyltransferase | EDC27_0399 | Not Available | Positive | 429856 - 431013 | 43543.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
