Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate carboxylase subunit b | EDC27_0369 | Not Available | Positive | 395731 - 397785 | 75514.5 |
| malate dehydrogenase (nad) | EDC27_0370 | Not Available | Positive | 397798 - 398733 | 33181.6 |
| molybdopterin synthase catalytic subunit | EDC27_0371 | Not Available | Negative | 398874 - 399233 | 13074.7 |
| methylmalonyl-coa mutase | EDC27_0372 | Not Available | Positive | 399699 - 401378 | 62664.1 |
| methylmalonyl-coa mutase c-terminal domain/subunit | EDC27_0373 | Not Available | Positive | 401509 - 401916 | 14641.0 |
| lao/ao transport system kinase | EDC27_0374 | Not Available | Positive | 401927 - 402877 | 34916.0 |
| hypothetical protein | EDC27_0375 | Not Available | Positive | 402972 - 403268 | 11037.2 |
| methylmalonyl-coa epimerase | EDC27_0376 | Not Available | Positive | 403498 - 403908 | 14718.8 |
| protoporphyrin ix magnesium-chelatase | EDC27_0377 | Not Available | Positive | 403919 - 405904 | 72296.5 |
| hypothetical protein | EDC27_0378 | Not Available | Positive | 405940 - 406401 | 17912.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
