Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | EDC27_0359 | Not Available | Positive | 388120 - 388644 | 19395.4 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | EDC27_0360 | Not Available | Positive | 388728 - 389357 | 22732.4 |
| hypothetical protein | EDC27_0361 | Not Available | Positive | 389383 - 390147 | 28320.0 |
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase | EDC27_0362 | Not Available | Positive | 390153 - 391355 | 42844.3 |
| dna polymerase | EDC27_0363 | Not Available | Positive | 391442 - 392245 | 30109.7 |
| nodulation efficiency protein nfed | EDC27_0364 | Not Available | Positive | 392269 - 393618 | 48226.7 |
| spfh domain-containing protein | EDC27_0365 | Not Available | Positive | 393672 - 394460 | 29276.8 |
| rho termination factor-like protein | EDC27_0366 | Not Available | Positive | 394453 - 394782 | 12466.6 |
| putative nucleotidyltransferase with hdig domain | EDC27_0367 | Not Available | Positive | 394807 - 395361 | 20610.0 |
| hypothetical protein | EDC27_0368 | Not Available | Positive | 395475 - 395684 | 7629.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
