Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyladenosine biosynthesis protein tsae | EDC27_0318 | Not Available | Positive | 330241 - 330774 | 19535.6 |
| radical sam superfamily enzyme ygiq (upf0313 family) | EDC27_0319 | Not Available | Negative | 330824 - 332341 | 58035.4 |
| glycine cleavage system transcriptional repressor | EDC27_0320 | Not Available | Positive | 332838 - 333395 | 20563.2 |
| hypothetical protein | EDC27_0321 | Not Available | Positive | 333442 - 334815 | 47636.9 |
| (r)-citramalate synthase | EDC27_0322 | Not Available | Negative | 335071 - 336678 | 59490.9 |
| hd domain-containing protein | EDC27_0323 | Not Available | Negative | 336741 - 337820 | 41511.3 |
| gaf domain-containing protein | EDC27_0324 | Not Available | Negative | 338023 - 338652 | 23321.3 |
| nadh:ubiquinone oxidoreductase subunit f (nadh-binding) | EDC27_0325 | Not Available | Negative | 338893 - 342558 | 135985.0 |
| putative fe-s cluster protein | EDC27_0326 | Not Available | Negative | 342728 - 347506 | 183969.0 |
| pyruvate/2-oxoacid:ferredoxin oxidoreductase alpha subunit | EDC27_0327 | Not Available | Negative | 347526 - 354056 | 244418.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
