Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [nife] hydrogenase large subunit | EDC27_3060 | Not Available | Positive | 3324485 - 3326125 | 60070.4 |
| hydrogenase maturation protease | EDC27_3061 | Not Available | Positive | 3326223 - 3326780 | 20091.3 |
| hydrogenase expression/formation protein hypc | EDC27_3062 | Not Available | Positive | 3326743 - 3326964 | 7894.62 |
| asparaginyl-trna synthetase | EDC27_3063 | Not Available | Negative | 3326989 - 3328389 | 53122.3 |
| 3-deoxy-d-manno-octulosonic-acid transferase | EDC27_3064 | Not Available | Positive | 3328724 - 3329962 | 46397.9 |
| hypothetical protein | EDC27_3065 | Not Available | Positive | 3330068 - 3330868 | 28492.7 |
| hypothetical protein | EDC27_3066 | Not Available | Positive | 3330878 - 3331303 | 16584.1 |
| hypothetical protein | EDC27_3067 | Not Available | Negative | 3331312 - 3331878 | 21264.8 |
| energy-coupling factor transporter transmembrane protein ecft | EDC27_3068 | Not Available | Negative | 3331875 - 3332582 | 26475.5 |
| energy-coupling factor transport system atp-binding protein | EDC27_3069 | Not Available | Negative | 3332579 - 3334039 | 53792.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
