Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease/helicase cas3 | EDC27_3026 | Not Available | Negative | 3284953 - 3287343 | 90152.3 |
| putative dna-binding transcriptional regulator yafy | EDC27_3027 | Not Available | Negative | 3287524 - 3288468 | 37282.0 |
| nad-dependent deacetylase | EDC27_3028 | Not Available | Negative | 3288678 - 3289436 | 28017.7 |
| ribosomal protein s6--l-glutamate ligase | EDC27_3029 | Not Available | Negative | 3289433 - 3290209 | 29982.0 |
| multimeric flavodoxin wrba | EDC27_3030 | Not Available | Positive | 3290302 - 3290898 | 22112.8 |
| hypothetical protein | EDC27_3031 | Not Available | Positive | 3291047 - 3291703 | 24009.0 |
| atp-binding cassette subfamily b protein | EDC27_3032 | Not Available | Positive | 3291714 - 3293489 | 64808.6 |
| atp-binding cassette subfamily b protein | EDC27_3033 | Not Available | Positive | 3293496 - 3295343 | 69130.5 |
| hypothetical protein | EDC27_3034 | Not Available | Positive | 3295355 - 3295852 | 18163.1 |
| hypothetical protein | EDC27_3035 | Not Available | Positive | 3295857 - 3296975 | 41619.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
