Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endoglucanase | EDC27_3016 | Not Available | Positive | 3264390 - 3265439 | 40240.8 |
| tetratricopeptide repeat protein | EDC27_3017 | Not Available | Positive | 3265465 - 3266085 | 22503.3 |
| tetratricopeptide repeat protein | EDC27_3018 | Not Available | Positive | 3266111 - 3268678 | 96450.8 |
| hypothetical protein | EDC27_3019 | Not Available | Positive | 3268976 - 3269125 | 5523.83 |
| hypothetical protein | EDC27_3020 | Not Available | Negative | 3270368 - 3271270 | 32812.7 |
| crispr-associated cas2 family protein | EDC27_3021 | Not Available | Negative | 3278199 - 3278486 | 11443.2 |
| crispr-associated cas1 family protein /crispr-associated cas4 family exonuclease | EDC27_3022 | Not Available | Negative | 3278529 - 3280250 | 65002.2 |
| crispr-associated protein csb2 | EDC27_3023 | Not Available | Negative | 3280357 - 3281841 | 56342.9 |
| crispr-associated protein csb1 | EDC27_3024 | Not Available | Negative | 3281845 - 3282786 | 34552.0 |
| crispr-associated protein csx17 | EDC27_3025 | Not Available | Negative | 3282816 - 3284960 | 79151.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
