Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit c | EDC27_3006 | Not Available | Positive | 3248681 - 3250810 | 80343.0 |
| uncharacterized protein duf721 | EDC27_3007 | Not Available | Negative | 3251507 - 3252040 | 20367.1 |
| Trna-arg | Not Available | Not Available | Positive | 3252091 - 3252167 | Not Available |
| hypothetical protein | EDC27_3009 | Not Available | Negative | 3252477 - 3252854 | 13495.5 |
| had superfamily hydrolase (tigr01509 family) | EDC27_3010 | Not Available | Positive | 3253159 - 3253905 | 26923.2 |
| xaa-pro aminopeptidase | EDC27_3011 | Not Available | Positive | 3253942 - 3255138 | 44084.8 |
| glycerol-3-phosphate acyltransferase | EDC27_3012 | Not Available | Negative | 3255156 - 3257846 | 104923.0 |
| dna replication and repair protein recn | EDC27_3013 | Not Available | Positive | 3257967 - 3259667 | 62739.3 |
| cellulose synthase (udp-forming) | EDC27_3014 | Not Available | Positive | 3259806 - 3262151 | 89195.7 |
| cellulose synthase subunit | EDC27_3015 | Not Available | Positive | 3262112 - 3264400 | 84031.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
