Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate ferredoxin oxidoreductase gamma subunit | EDC27_0298 | Not Available | Negative | 311143 - 311739 | 21299.5 |
| hypothetical protein | EDC27_0299 | Not Available | Positive | 311933 - 312328 | 15913.1 |
| l,d-transpeptidase-like protein | EDC27_0300 | Not Available | Negative | 312437 - 313141 | 26534.8 |
| type iv pilus secretin pilq/predicted competence protein | EDC27_0301 | Not Available | Negative | 313178 - 315007 | 65889.1 |
| type iv pilus assembly protein pilo | EDC27_0302 | Not Available | Negative | 315096 - 315707 | 23358.5 |
| type iv pilus assembly protein piln | EDC27_0303 | Not Available | Negative | 315724 - 316377 | 24847.3 |
| type iv pilus assembly protein pilm | EDC27_0304 | Not Available | Negative | 316374 - 317429 | 38855.1 |
| signal peptidase i | EDC27_0305 | Not Available | Positive | 317557 - 318222 | 25425.9 |
| nad+ synthetase | EDC27_0306 | Not Available | Positive | 318283 - 319737 | 54172.9 |
| uncharacterized protein ybbc (duf1343 family) | EDC27_0307 | Not Available | Negative | 319726 - 320964 | 46744.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
