Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | EDC27_0288 | Not Available | Positive | 302497 - 303378 | 31965.9 |
| phosphoglucosamine mutase | EDC27_0289 | Not Available | Positive | 303399 - 304757 | 49591.5 |
| pantothenate kinase | EDC27_0290 | Not Available | Positive | 304792 - 305562 | 28086.5 |
| muramoyltetrapeptide carboxypeptidase | EDC27_0291 | Not Available | Positive | 305565 - 306503 | 34710.7 |
| cubico group peptidase (beta-lactamase class c family) | EDC27_0292 | Not Available | Positive | 306500 - 307606 | 42072.4 |
| udp-n-acetylmuramate--l-alanine ligase | EDC27_0293 | Not Available | Positive | 307603 - 309099 | 55820.4 |
| hypothetical protein | EDC27_0294 | Not Available | Positive | 309096 - 309662 | 22266.7 |
| heme-degrading monooxygenase hmoa | EDC27_0295 | Not Available | Negative | 309653 - 309940 | 11048.4 |
| methyltransferase family protein | EDC27_0296 | Not Available | Positive | 310040 - 310798 | 27986.0 |
| pyruvate ferredoxin oxidoreductase delta subunit | EDC27_0297 | Not Available | Negative | 310807 - 311094 | 10691.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
