Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hae1 family hydrophobic/amphiphilic exporter-1 | EDC27_2772 | Not Available | Negative | 2991843 - 2994977 | 116137.0 |
| membrane fusion protein (multidrug efflux system) | EDC27_2773 | Not Available | Negative | 2995031 - 2996170 | 42227.3 |
| outer membrane protein tolc | EDC27_2774 | Not Available | Negative | 2996160 - 2997599 | 53884.4 |
| hypothetical protein | EDC27_2775 | Not Available | Positive | 2998186 - 2998371 | 6891.24 |
| hypothetical protein | EDC27_2776 | Not Available | Positive | 2998538 - 2999437 | 32543.5 |
| histidine ammonia-lyase | EDC27_2777 | Not Available | Negative | 2999638 - 3001167 | 54843.6 |
| sodium/bile acid cotransporter 7 | EDC27_2778 | Not Available | Negative | 3001164 - 3002255 | 38865.1 |
| gamma-glutamyltranspeptidase/glutathione hydrolase | EDC27_2779 | Not Available | Positive | 3002622 - 3004385 | 64558.8 |
| trap-type mannitol/chloroaromatic compound transport system permease small subunit | EDC27_2780 | Not Available | Positive | 3004419 - 3004961 | 19991.9 |
| tripartite atp-independent transporter dctm subunit | EDC27_2781 | Not Available | Positive | 3004961 - 3006277 | 47521.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
