Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | EDC27_2655 | Not Available | Negative | 2873966 - 2875630 | 62550.1 |
| glycosyltransferase involved in cell wall biosynthesis | EDC27_2656 | Not Available | Negative | 2875709 - 2877346 | 61854.5 |
| tfp pilus assembly protein pilf | EDC27_2657 | Not Available | Negative | 2877365 - 2878453 | 40394.6 |
| hypothetical protein | EDC27_2658 | Not Available | Positive | 2880022 - 2881695 | 63943.4 |
| udp-galactopyranose mutase | EDC27_2659 | Not Available | Positive | 2881661 - 2883037 | 52795.9 |
| gt2 family glycosyltransferase | EDC27_2660 | Not Available | Positive | 2883024 - 2884718 | 64632.4 |
| gt2 family glycosyltransferase | EDC27_2661 | Not Available | Negative | 2884729 - 2886726 | 74001.5 |
| 4-amino-4-deoxy-l-arabinose transferase-like glycosyltransferase | EDC27_2663 | Not Available | Positive | 2888271 - 2890754 | 90897.3 |
| glycosyl transferase family 2 | EDC27_2665 | Not Available | Positive | 2891510 - 2893132 | 60885.9 |
| cdp-glycerol glycerophosphotransferase (tagb/spsb family) | EDC27_2666 | Not Available | Positive | 2893328 - 2894428 | 42105.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
