Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dodecin | EDC27_2567 | Not Available | Positive | 2790908 - 2791051 | 5169.03 |
| methylmalonyl-coa mutase c-terminal domain/subunit | EDC27_2568 | Not Available | Positive | 2791215 - 2791613 | 14560.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | EDC27_2570 | Not Available | Positive | 2792413 - 2793156 | 27017.5 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EDC27_2571 | Not Available | Positive | 2793153 - 2793653 | 17564.5 |
| cysteinyl-trna synthetase | EDC27_2572 | Not Available | Positive | 2793650 - 2795134 | 56263.4 |
| putative fmdb family regulatory protein | EDC27_2573 | Not Available | Negative | 2795355 - 2795606 | 8293.9 |
| putative fe-mo cluster-binding nifx family protein | EDC27_2574 | Not Available | Negative | 2795627 - 2796007 | 13210.9 |
| hypothetical protein | EDC27_2575 | Not Available | Positive | 2796274 - 2796729 | 17595.2 |
| nanornase/pap phosphatase (c-di-amp/oligornas hydrolase) | EDC27_2576 | Not Available | Negative | 2796847 - 2798139 | 47041.1 |
| nucleotide-binding universal stress uspa family protein | EDC27_2578 | Not Available | Negative | 2799627 - 2800085 | 16799.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
