Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC27_2557 | Not Available | Negative | 2783268 - 2783375 | 4117.89 |
| nitrate/nitrite sensing protein | EDC27_2558 | Not Available | Negative | 2783375 - 2785303 | 69390.4 |
| hypothetical protein | EDC27_2559 | Not Available | Negative | 2785333 - 2785515 | 6539.97 |
| hypothetical protein | EDC27_2560 | Not Available | Negative | 2785460 - 2785633 | 7093.54 |
| myo-inositol-1(or 4)-monophosphatase | EDC27_2561 | Not Available | Negative | 2785737 - 2786540 | 29826.4 |
| 23s rrna um-2552 2'-o-methyltransferase | EDC27_2562 | Not Available | Positive | 2786855 - 2787454 | 22525.4 |
| yebc/pmpr family dna-binding regulatory protein | EDC27_2563 | Not Available | Positive | 2787470 - 2788219 | 27302.3 |
| holliday junction endonuclease ruvc | EDC27_2564 | Not Available | Positive | 2788238 - 2788738 | 17562.4 |
| holliday junction dna helicase subunit ruva | EDC27_2565 | Not Available | Positive | 2788735 - 2789343 | 22199.2 |
| holliday junction dna helicase subunit ruvb | EDC27_2566 | Not Available | Positive | 2789760 - 2790779 | 38336.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
