Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein alpha subunit apoprotein | EDC27_2516 | Not Available | Positive | 2739123 - 2740307 | 42567.4 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | EDC27_2517 | Not Available | Positive | 2740398 - 2741141 | 26028.3 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | EDC27_2518 | Not Available | Positive | 2741193 - 2742446 | 44199.0 |
| ribose 5-phosphate isomerase b | EDC27_2519 | Not Available | Positive | 2742475 - 2742927 | 16525.9 |
| serine hydroxymethyltransferase | EDC27_2520 | Not Available | Positive | 2742924 - 2744243 | 47648.2 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | EDC27_2521 | Not Available | Positive | 2744319 - 2745542 | 44084.6 |
| riboflavin synthase alpha chain | EDC27_2522 | Not Available | Positive | 2745749 - 2746417 | 23960.0 |
| gtp cyclohydrolase ii /3,4-dihydroxy-2-butanone 4-phosphate synthase | EDC27_2523 | Not Available | Positive | 2746552 - 2747790 | 45296.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | EDC27_2524 | Not Available | Positive | 2747777 - 2748238 | 16212.6 |
| nusb antitermination factor | EDC27_2525 | Not Available | Positive | 2748247 - 2748678 | 16150.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
