Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal peptide maturation radical sam protein 1 | EDC27_2495 | Not Available | Positive | 2716579 - 2718489 | 72223.3 |
| oop family ompa-ompf porin | EDC27_2496 | Not Available | Positive | 2718933 - 2719961 | 37406.5 |
| hypothetical protein | EDC27_2497 | Not Available | Positive | 2720034 - 2720453 | 15619.7 |
| atp-binding cassette subfamily f protein 3 | EDC27_2498 | Not Available | Positive | 2720465 - 2722459 | 75159.4 |
| glycine zipper 2tm protein | EDC27_2499 | Not Available | Positive | 2722526 - 2722930 | 14324.1 |
| dna polymerase iii chi subunit | EDC27_2501 | Not Available | Negative | 2723253 - 2723735 | 17943.8 |
| hypothetical protein | EDC27_2502 | Not Available | Negative | 2723747 - 2724088 | 12540.3 |
| dna polymerase-3 subunit alpha | EDC27_2503 | Not Available | Negative | 2724128 - 2727637 | 131094.0 |
| putative protease | EDC27_2504 | Not Available | Negative | 2727694 - 2729907 | 83324.6 |
| creatinine amidohydrolase | EDC27_2505 | Not Available | Negative | 2729904 - 2730635 | 26992.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
