Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | EDC27_2434 | Not Available | Positive | 2646403 - 2649114 | 101176.0 |
| l-lysine 2,3-aminomutase | EDC27_2435 | Not Available | Positive | 2649273 - 2650565 | 48249.5 |
| hypothetical protein | EDC27_2436 | Not Available | Positive | 2650579 - 2650773 | 7087.36 |
| d-alanine-d-alanine ligase | EDC27_2437 | Not Available | Positive | 2650828 - 2651628 | 29802.1 |
| hypothetical protein | EDC27_2438 | Not Available | Positive | 2651694 - 2652431 | 27322.5 |
| uncharacterized membrane-anchored protein yitt (duf2179 family) | EDC27_2439 | Not Available | Positive | 2652428 - 2653315 | 32085.2 |
| small-conductance mechanosensitive channel | EDC27_2441 | Not Available | Positive | 2654153 - 2656732 | 96936.4 |
| hypothetical protein | EDC27_2442 | Not Available | Positive | 2656740 - 2657312 | 21106.3 |
| hypothetical protein | EDC27_2443 | Not Available | Negative | 2657736 - 2658131 | 14318.5 |
| autotransporter translocation and assembly factor tamb | EDC27_2444 | Not Available | Negative | 2658237 - 2662085 | 139540.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
