Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress uspa family protein | EDC27_0248 | Not Available | Positive | 257747 - 258637 | 32903.6 |
| l-threonine synthase | EDC27_0249 | Not Available | Negative | 258693 - 260192 | 55113.7 |
| hypothetical protein | EDC27_0250 | Not Available | Negative | 260232 - 260936 | 24378.7 |
| hypothetical protein | EDC27_0251 | Not Available | Negative | 261590 - 262243 | 23761.7 |
| nitrate/nitrite transporter nark | EDC27_0252 | Not Available | Negative | 262414 - 263697 | 45012.8 |
| kipi family sensor histidine kinase inhibitor | EDC27_0253 | Not Available | Positive | 264489 - 265172 | 25116.2 |
| antagonist of kipi | EDC27_0254 | Not Available | Positive | 265153 - 266112 | 34701.9 |
| upf0271 protein | EDC27_0255 | Not Available | Positive | 266109 - 266876 | 27620.4 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | EDC27_0256 | Not Available | Positive | 267033 - 268022 | 35480.7 |
| trap-type mannitol/chloroaromatic compound transport system permease small subunit | EDC27_0257 | Not Available | Positive | 268291 - 268794 | 18548.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
