Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp adenylyltransferase | EDC27_2389 | Not Available | Positive | 2598119 - 2598619 | 19331.6 |
| hypothetical protein | EDC27_2390 | Not Available | Positive | 2598606 - 2598986 | 14558.9 |
| dna mismatch repair protein muts | EDC27_2391 | Not Available | Positive | 2599014 - 2601791 | 103125.0 |
| n-acetylmuramoyl-l-alanine amidase | EDC27_2392 | Not Available | Positive | 2601788 - 2603617 | 67583.7 |
| exoribonuclease-2 | EDC27_2393 | Not Available | Positive | 2603614 - 2605638 | 76700.0 |
| peptide chain release factor 2 (brf-2) | EDC27_2394 | Not Available | Negative | 2605906 - 2607043 | 42781.7 |
| apolipoprotein n-acyltransferase | EDC27_2395 | Not Available | Negative | 2607069 - 2608670 | 58722.7 |
| magnesium and cobalt transporter | EDC27_2396 | Not Available | Negative | 2608688 - 2609560 | 33048.5 |
| agmatinase | EDC27_2397 | Not Available | Negative | 2609655 - 2610569 | 33313.6 |
| s-adenosylmethionine decarboxylase | EDC27_2398 | Not Available | Negative | 2610576 - 2611025 | 17561.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
