Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | EDC27_2289 | Not Available | Positive | 2488390 - 2488947 | 20461.8 |
| geranylgeranyl reductase family protein | EDC27_2290 | Not Available | Negative | 2488913 - 2490055 | 41459.2 |
| lps export abc transporter protein lptc | EDC27_2291 | Not Available | Positive | 2490253 - 2490819 | 21581.8 |
| lipopolysaccharide export system protein lpta | EDC27_2292 | Not Available | Positive | 2490838 - 2491449 | 21725.3 |
| lipopolysaccharide export system atp-binding protein | EDC27_2293 | Not Available | Positive | 2491446 - 2492177 | 27292.3 |
| rna polymerase rpon-/sigl-like sigma 54 subunit | EDC27_2294 | Not Available | Positive | 2492193 - 2493644 | 55787.7 |
| putative sigma-54 modulation protein | EDC27_2295 | Not Available | Positive | 2493702 - 2494241 | 20669.9 |
| phosphotransferase iia-like nitrogen-regulatory protein ptsn | EDC27_2296 | Not Available | Positive | 2494322 - 2494783 | 17175.9 |
| upf0042 nucleotide-binding protein | EDC27_2297 | Not Available | Positive | 2495015 - 2495893 | 33121.1 |
| pts system mannose-specific iia component | EDC27_2298 | Not Available | Positive | 2495945 - 2496403 | 16408.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
