Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system atp-binding protein | EDC27_2279 | Not Available | Negative | 2476923 - 2477684 | 27584.2 |
| amino acid/amide abc transporter atp-binding protein 1 (haat family) | EDC27_2280 | Not Available | Negative | 2477681 - 2478430 | 27176.1 |
| branched-chain amino acid transport system permease protein | EDC27_2281 | Not Available | Negative | 2478427 - 2479377 | 33585.8 |
| branched-chain amino acid transport system permease protein | EDC27_2282 | Not Available | Negative | 2479374 - 2480243 | 31215.3 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | EDC27_2283 | Not Available | Negative | 2480261 - 2481466 | 43750.1 |
| 7, 8-dihydropterin-6-yl-methyl-4-(beta-d- ribofuranosyl)aminobenzene 5'-phosphate synthase | EDC27_2284 | Not Available | Negative | 2481585 - 2482520 | 34174.3 |
| 2-aminobenzoate-coa ligase | EDC27_2285 | Not Available | Negative | 2482828 - 2484468 | 60268.3 |
| acetoin utilization protein acub | EDC27_2286 | Not Available | Negative | 2484833 - 2485441 | 22246.3 |
| ctp synthase | EDC27_2287 | Not Available | Positive | 2485714 - 2487411 | 64012.7 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | EDC27_2288 | Not Available | Positive | 2487418 - 2488287 | 31613.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
