Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphodiesterase | EDC27_2226 | Not Available | Positive | 2428286 - 2429011 | 27434.9 |
| serine/threonine-protein kinase | EDC27_2227 | Not Available | Positive | 2429033 - 2430397 | 52185.7 |
| yihy family inner membrane protein | EDC27_2228 | Not Available | Positive | 2430394 - 2431800 | 52843.9 |
| glutamate 5-kinase | EDC27_2229 | Not Available | Positive | 2432687 - 2433904 | 44686.1 |
| glutamate-5-semialdehyde dehydrogenase | EDC27_2230 | Not Available | Positive | 2433940 - 2435196 | 46319.4 |
| nicotinate-nucleotide adenylyltransferase | EDC27_2231 | Not Available | Positive | 2435220 - 2435930 | 26887.7 |
| ribosome-associated protein | EDC27_2232 | Not Available | Positive | 2435941 - 2436357 | 15495.6 |
| putative zn-dependent protease | EDC27_2233 | Not Available | Positive | 2436354 - 2437763 | 52994.3 |
| hypothetical protein | EDC27_2234 | Not Available | Negative | 2438037 - 2438213 | 6816.03 |
| hypothetical protein | EDC27_2235 | Not Available | Negative | 2438242 - 2438490 | 9276.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
