Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoate-protein ligase a | EDC27_2216 | Not Available | Negative | 2419842 - 2420819 | 36717.1 |
| hypothetical protein | EDC27_2217 | Not Available | Positive | 2421027 - 2421563 | 20978.7 |
| hypothetical protein | EDC27_2218 | Not Available | Positive | 2421815 - 2421967 | 5642.64 |
| nucleotidyltransferase-like protein | EDC27_2219 | Not Available | Positive | 2422192 - 2422548 | 13810.6 |
| uncharacterized protein yece (duf72 family) | EDC27_2220 | Not Available | Negative | 2422709 - 2423437 | 28693.0 |
| Trna-thr | Not Available | Not Available | Positive | 2423499 - 2423573 | Not Available |
| endoribonuclease l-psp | EDC27_2222 | Not Available | Negative | 2423834 - 2424217 | 13809.7 |
| putative glycosyltransferase | EDC27_2223 | Not Available | Positive | 2424434 - 2425645 | 45379.7 |
| glycosyltransferase involved in cell wall biosynthesis | EDC27_2224 | Not Available | Positive | 2425636 - 2426925 | 48124.4 |
| glycosyltransferase involved in cell wall biosynthesis | EDC27_2225 | Not Available | Positive | 2426922 - 2428031 | 42168.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
