Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosine kinase | EDC27_0228 | Not Available | Negative | 235204 - 236151 | 34711.2 |
| atp-dependent rna helicase rhlb | EDC27_0229 | Not Available | Negative | 236206 - 237657 | 54582.6 |
| hypothetical protein | EDC27_0230 | Not Available | Positive | 237878 - 238624 | 27576.3 |
| ybgc/ybaw family acyl-coa thioester hydrolase | EDC27_0231 | Not Available | Negative | 238652 - 239167 | 19793.9 |
| superfamily ii rna helicase | EDC27_0232 | Not Available | Positive | 239264 - 241978 | 102779.0 |
| putative phosphodiesterase | EDC27_0233 | Not Available | Positive | 242022 - 242771 | 27927.5 |
| rimj/riml family protein n-acetyltransferase | EDC27_0234 | Not Available | Positive | 242822 - 243403 | 22105.0 |
| serine/threonine protein kinase | EDC27_0235 | Not Available | Negative | 243413 - 244747 | 50515.6 |
| nitrate/nitrite transporter nark | EDC27_0236 | Not Available | Negative | 244898 - 246160 | 44814.9 |
| hypothetical protein | EDC27_0237 | Not Available | Negative | 246719 - 247120 | 15076.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
