Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Syntrophobacteria
Order
Syntrophobacterales
Family
Syntrophobacteraceae
Genus
Desulfosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Syntrophobacteria |
| Order | Syntrophobacterales |
| Family | Syntrophobacteraceae |
| Genus | Desulfosoma |
| Species | Desulfosoma caldarium |
| Strain | DSM 22027 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | hot spring; Kamchatka hot springs; terrestrial hot springs |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
736389 bp
Thymine Count
741186 bp
Guanine Count
972271 bp
Cytosine Count
973489 bp
Genome Length
3424775 bp
Protein-coding Genes
2925 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| archaemetzincin | EDC27_2104 | Not Available | Positive | 2303989 - 2304627 | 23463.7 |
| coenzyme f420-reducing hydrogenase delta subunit | EDC27_2105 | Not Available | Positive | 2304831 - 2305196 | 13373.4 |
| methylene-tetrahydrofolate reductase-like protein | EDC27_2106 | Not Available | Positive | 2305329 - 2306000 | 24485.1 |
| 5,10-methylenetetrahydrofolate reductase (ferredoxin) | EDC27_2107 | Not Available | Positive | 2305997 - 2306923 | 34181.8 |
| co dehydrogenase maturation factor | EDC27_2108 | Not Available | Positive | 2307126 - 2307884 | 27410.5 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | EDC27_2109 | Not Available | Positive | 2307971 - 2308561 | 21339.9 |
| phosphoribosylamine--glycine ligase | EDC27_2110 | Not Available | Positive | 2308649 - 2309944 | 46998.6 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EDC27_2111 | Not Available | Positive | 2310106 - 2310630 | 17992.1 |
| translation factor sua5 | EDC27_2112 | Not Available | Positive | 2310630 - 2311301 | 23942.8 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | EDC27_2113 | Not Available | Positive | 2311331 - 2313463 | 79562.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
